Mapping Details

GENETIC MAPPING PANELS

Chr	Location	Mapped As	Panel	Mapped By	Scoring
5	83.1 cM	z23075	Boston MGH Cross (MGH)	Fishman, Mark C.	Data
5	346.21 cR	Z23075	Loeb/NIH/5000/4000 (LN54)	Dawid, Igor B.	Data
5	6345.0 cR	z23075	Goodfellow T51 (T51)	Geisler, Robert	Data
Note: Physical map location as displayed in the genome browsers is more precise than linkage map location. Note: Physical map location should be used whenever possible.

MAPPING FROM PUBLICATIONS

Marker	Type	Chr	Distance	Publication / Person	Comments
mir34c	MIRNAG	5		Auer et al., 2007	Auer RL et al (Br. J Hematol. 137, 443-453) mapped the zebrafish orthologs and  ... Auer RL et al (Br. J Hematol. 137, 443-453) mapped the zebrafish orthologs and syntenic region on human 11q22-23 to zebrafish LG 5. The genes were mapped using the LN54 RH panel in the order: (btg4, z13883) - timm8b - hspb2- (mirn34b, mirn34c) - cryabb - z23075.
z13883	SSLP	5		Auer et al., 2007	Auer RL et al (Br. J Hematol. 137, 443-453) mapped the zebrafish orthologs and  ... Auer RL et al (Br. J Hematol. 137, 443-453) mapped the zebrafish orthologs and syntenic region on human 11q22-23 to zebrafish LG 5. The genes were mapped using the LN54 RH panel in the order: (btg4, z13883) - timm8b - hspb2- (mirn34b, mirn34c) - cryabb - z23075.
cryabb	GENE	5	28.42 cR	Auer et al., 2007	Auer RL et al (Br. J Hematol. 137, 443-453) mapped the zebrafish orthologs and  ... Auer RL et al (Br. J Hematol. 137, 443-453) mapped the zebrafish orthologs and syntenic region on human 11q22-23 to zebrafish LG 5. The genes were mapped using the LN54 RH panel in the order: (btg4, z13883) - timm8b - hspb2- (mirn34b, mirn34c) - cryabb - z23075.
btg4	GENE	5		Auer et al., 2007	Auer RL et al (Br. J Hematol. 137, 443-453) mapped the zebrafish orthologs and  ... Auer RL et al (Br. J Hematol. 137, 443-453) mapped the zebrafish orthologs and syntenic region on human 11q22-23 to zebrafish LG 5. The genes were mapped using the LN54 RH panel in the order: (btg4, z13883) - timm8b - hspb2- (mirn34b, mirn34c) - cryabb - z23075.
hspb2	GENE	5		Auer et al., 2007	Auer RL et al (Br. J Hematol. 137, 443-453) mapped the zebrafish orthologs and  ... Auer RL et al (Br. J Hematol. 137, 443-453) mapped the zebrafish orthologs and syntenic region on human 11q22-23 to zebrafish LG 5. The genes were mapped using the LN54 RH panel in the order: (btg4, z13883) - timm8b - hspb2- (mirn34b, mirn34c) - cryabb - z23075.
mir34b	MIRNAG	5		Auer et al., 2007	Auer RL et al (Br. J Hematol. 137, 443-453) mapped the zebrafish orthologs and  ... Auer RL et al (Br. J Hematol. 137, 443-453) mapped the zebrafish orthologs and syntenic region on human 11q22-23 to zebrafish LG 5. The genes were mapped using the LN54 RH panel in the order: (btg4, z13883) - timm8b - hspb2- (mirn34b, mirn34c) - cryabb - z23075.
timm8b	GENE	5		Auer et al., 2007	Auer RL et al (Br. J Hematol. 137, 443-453) mapped the zebrafish orthologs and  ... Auer RL et al (Br. J Hematol. 137, 443-453) mapped the zebrafish orthologs and syntenic region on human 11q22-23 to zebrafish LG 5. The genes were mapped using the LN54 RH panel in the order: (btg4, z13883) - timm8b - hspb2- (mirn34b, mirn34c) - cryabb - z23075.

OTHER MAPPING INFORMATION

Primer Sets:

Strain	Bandsize	Restriction Enzyme	Annealing Temperature [C]
AB	0,173,161		60.0
Forward Primer	GCTTTCCTGGCAGTCAAAAC
Reverse Primer	GCATGCAGGAACAAGTGCTA
IND	155,0,171,157		60.0
Forward Primer	GCTTTCCTGGCAGTCAAAAC
Reverse Primer	GCATGCAGGAACAAGTGCTA
EKW	173,161		60.0
Forward Primer	GCTTTCCTGGCAGTCAAAAC
Reverse Primer	GCATGCAGGAACAAGTGCTA
TU	0,159		60.0
Forward Primer	GCTTTCCTGGCAGTCAAAAC
Reverse Primer	GCATGCAGGAACAAGTGCTA