Gene

cabp2b

ID
ZDB-GENE-081028-55
Name
calcium binding protein 2b
Symbol
cabp2b Nomenclature History
Previous Names
  • si:ch211-113d11.4 (1)
Type
protein_coding_gene
Location
Chr: 14 Mapping Details/Browsers
Description
Predicted to enable calcium channel regulator activity. Predicted to be active in cytoplasm. Is expressed in inner ear; neuromast; and utricle. Human ortholog(s) of this gene implicated in autosomal recessive nonsyndromic deafness 93. Orthologous to human CABP2 (calcium binding protein 2).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
4 figures from 2 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
No data available
Sequence Targeting Reagents
Targeting Reagent Created Alleles Citations
CRISPR1-cabp2b
    Lin et al., 2025
    CRISPR2-cabp2b
      Lin et al., 2025
      1 - 2 of 2
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      Human Disease
      Associated With cabp2b Human Ortholog
      Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
      autosomal recessive nonsyndromic deafness 93 Alliance Deafness, autosomal recessive 93 614899
      1 - 1 of 1
      Associated With cabp2b Via Experimental Models
      No data available
      Gene Ontology
      Protein Domains
      Domain, Family, and Site Summary
      Type InterPro ID Name
      Binding_site IPR018247 EF-Hand 1, calcium-binding site
      Domain IPR002048 EF-hand domain
      Family IPR043582 Calcium binding protein 1/2/4/5
      Homologous_superfamily IPR011992 EF-hand domain pair
      1 - 4 of 4
      Domain Details Per Protein
      Protein Additional Resources Length Calcium binding protein 1/2/4/5 EF-Hand 1, calcium-binding site EF-hand domain EF-hand domain pair
      UniProtKB:A0A8M9PZY4 InterPro 251
      UniProtKB:A0A8M9QBP2 InterPro 228
      UniProtKB:A0A2R8QK74 InterPro 163
      UniProtKB:A0A8M9QL43 InterPro 262
      1 - 4 of 4
      Transcripts
      Genome Browsers
      Genome Build: GRCz11Chromosome: 14
      Type Name Annotation Method Has Havana Data Length (nt) Analysis
      mRNA cabp2b-201 (1) Ensembl 648 nt
      mRNA cabp2b-202 (1) Ensembl 889 nt
      mRNA cabp2b-203 (1) Ensembl 917 nt
      mRNA cabp2b-205 (1) Ensembl 2,724 nt
      mRNA cabp2b-206 (1) Ensembl 1,460 nt
      1 - 5 of 6 Show all
      Interactions and Pathways
      No data available
      Antibodies
      No data available
      Plasmids
      No data available
      Constructs
      No data available
      Marker Relationships
      Relationship Marker Type Marker Accession Numbers Citations
      Contained inBACCH211-113D11ZFIN Curated Data
      1 - 1 of 1
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      Sequences
      Orthology
      Comparative Orthology
      Alliance
      Gene Tree
      Ensembl
      Species Symbol Chromosome Accession # Evidence
      HumanCABP211
      Amino acid sequence comparison (1)
      Citations
      1 - 7 of 7
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