Gene

trappc11

ID
ZDB-GENE-030131-1723
Name
trafficking protein particle complex subunit 11
Symbol
trappc11 Nomenclature History
Previous Names
  • c4orf41
  • fb78g05
  • fgr (1)
  • flj12716l
  • foie gras (1)
  • foigr
  • wu:fb78g05
  • zgc:136723
  • zgc:63684
Type
protein_coding_gene
Location
Chr: 14 Mapping Details/Browsers
Description
Acts upstream of or within several processes, including liver development; protein N-linked glycosylation; and protein secretion. Predicted to be located in Golgi apparatus. Used to study autosomal recessive limb-girdle muscular dystrophy type 2S and steatotic liver disease. Human ortholog(s) of this gene implicated in autosomal recessive limb-girdle muscular dystrophy type 2S. Orthologous to human TRAPPC11 (trafficking protein particle complex subunit 11).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
3 figures from 3 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
21 figures from 8 publications
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Allele Type Localization Consequence Mutagen Supplier
hi1532bTgTransgenic insertionIntron 12Frameshift, Premature StopDNA
sa22424Allele with one point mutationUnknownPremature StopENU
sa30977Allele with one point mutationUnknownSplice SiteENU
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Sequence Targeting Reagents
Targeting Reagent Created Alleles Citations
MO1-trappc11N/A (2)
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Human Disease
Associated With trappc11 Human Ortholog
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
autosomal recessive limb-girdle muscular dystrophy type 2S Alliance Muscular dystrophy, limb-girdle, autosomal recessive 18 615356
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Associated With trappc11 Via Experimental Models
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR021773 Trafficking protein particle complex subunit 11
Domain IPR025876 Trafficking protein particle complex subunit 11, C-terminal
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Domain Details Per Protein
Protein Additional Resources Length Trafficking protein particle complex subunit 11 Trafficking protein particle complex subunit 11, C-terminal
UniProtKB:Q1RLX4 InterPro 1132
UniProtKB:A0A9U5BZX5 InterPro 1132
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Transcripts
Genome Browsers
Genome Build: GRCz11Chromosome: 14
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA trappc11-201 (1) Ensembl 3,843 nt
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Interactions and Pathways
No data available
Antibodies
Name Type Antigen Genes Isotype Host Organism Assay Source Citations
Ab1-trappc11 polyclonal Rabbit
  • WB
1
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Plasmids
Constructs
No data available
Marker Relationships
Relationship Marker Type Marker Accession Numbers Citations
Contained inBACCH211-51F19ZFIN Curated Data
Contained inBACCH211-235C4ZFIN Curated Data
EncodesESTfb78g05
EncodesESTIMAGE:7157127Thisse et al., 2004
EncodescDNAMGC:63684ZFIN Curated Data
EncodescDNAMGC:136723ZFIN Curated Data
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Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Species Symbol Chromosome Accession # Evidence
HumanTRAPPC114
Amino acid sequence comparison (1)
Conserved genome location (synteny) (1)
MouseTrappc118
Amino acid sequence comparison (1)
Conserved genome location (synteny) (1)
Citations
1 - 10 of 13
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