Gene
prkci
- ID
- ZDB-GENE-011105-1
- Name
- protein kinase C, iota
- Symbol
- prkci Nomenclature History
- Previous Names
- Type
- protein_coding_gene
- Location
- Chr: 2 Mapping Details/Browsers
- Description
- Predicted to enable phospholipid binding activity and protein serine/threonine kinase activity. Acts upstream of with a negative effect on apical protein localization. Acts upstream of or within several processes, including digestive tract development; morphogenesis of an epithelium; and nervous system development. Located in plasma membrane and zonula adherens. Is expressed in several structures, including blastoderm; common cardinal vein; epidermal cell; eye; and posterior lateral line primordium. Orthologous to human PRKCI (protein kinase C iota).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 12 figures from 12 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
-
- eu720 (1 image)
Wild Type Expression Summary
- All Phenotype Data
- 40 figures from 21 publications
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Allele | Type | Localization | Consequence | Mutagen | Supplier |
---|---|---|---|---|---|
hi3208Tg | Transgenic insertion | Exon 11 | Unknown | DNA | |
m129 | Allele with one point mutation | Unknown | Premature Stop | ENU | |
m567 | Allele with one point mutation | Unknown | Premature Stop | ENU | |
m781 | unknown | Unknown | Unknown | ENU | |
pd1260Tg | Transgenic insertion | Unknown | Unknown | DNA and CRISPR | |
sa14108 | Allele with one point mutation | Unknown | Premature Stop | ENU | |
sa17535 | Allele with one point mutation | Unknown | Premature Stop | ENU |
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Targeting Reagent | Created Alleles | Citations |
---|---|---|
CRISPR1-prkci | Levic et al., 2021 | |
MO1-prkci | N/A | (18) |
MO2-prkci | N/A | (2) |
MO3-prkci | N/A | (2) |
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Human Disease
Domain, Family, and Site Summary
Domain Details Per Protein
Protein | Additional Resources | Length | AGC-kinase, C-terminal | Atypical protein kinase C iota type, catalytic domain | C1-like domain superfamily | Diacylglycerol/phorbol-ester binding | PB1 domain | PB1-like domain | Protein kinase, ATP binding site | Protein kinase C | Protein kinase C-like, phorbol ester/diacylglycerol-binding domain | Protein kinase C, PB1 domain | Protein kinase, C-terminal | Protein kinase domain | Protein kinase-like domain superfamily | Serine/threonine-protein kinase, active site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
UniProtKB:Q6DI53 | InterPro | 588 | ||||||||||||||
UniProtKB:Q90XF2 | InterPro | 588 |
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Interactions and Pathways
No data available
Name | Type | Antigen Genes | Isotype | Host Organism | Assay | Source | Citations |
---|---|---|---|---|---|---|---|
Ab1-prkcz | polyclonal | IgG | Rabbit |
|
Santa Cruz Biotechnology, Inc.
|
102 |
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Plasmids
No data available
Construct | Regulatory Region | Coding Sequence | Species | Tg Lines | Citations |
---|---|---|---|---|---|
Tg1(5xUAS:mir30e-2-shRNAprkci,Tomato) |
| 1 | (2) | ||
Tg2(5xUAS:mir30e-2-shRNAprkci,Tomato) |
| 1 | (2) | ||
Tg(hsp70l:mKate2-prkci-CAAX) |
| 1 | Icha et al., 2016 | ||
Tg(myl7:prkci) |
|
| 1 | (6) |
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Relationship | Marker Type | Marker | Accession Numbers | Citations |
---|---|---|---|---|
Contained in | BAC | DKEY-31B10 | ZFIN Curated Data | |
Encodes | EST | eu720 | Thisse et al., 2005 | |
Encodes | cDNA | MGC:55201 | ZFIN Curated Data | |
Encodes | cDNA | MGC:86563 | ZFIN Curated Data |
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Type | Accession # | Sequence | Length (nt/aa) | Analysis |
---|---|---|---|---|
RNA | RefSeq:NM_131855 (1) | 3528 nt | ||
Genomic | GenBank:BX511231 (2) | 93016 nt | ||
Polypeptide | UniProtKB:Q6DI53 (1) | 588 aa |
- Boueid, M.J., Mikdache, A., Lesport, E., Delespierre, B., Loisel-Duwattez, J., Degerny, C., Tawk, M. (2022) Pals1a and aPKCλ are not essential for Schwann cell migration, division or myelination in zebrafish. Developmental Dynamics : an official publication of the American Association of Anatomists. 252(1):145-155
- Garcia-Concejo, A., Larhammar, D. (2021) Protein kinase C family evolution in jawed vertebrates. Developmental Biology. 479:77-90
- Levic, D.S., Yamaguchi, N., Wang, S., Knaut, H., Bagnat, M. (2021) Knock-in tagging in zebrafish facilitated by insertion into non-coding regions. Development (Cambridge, England). 148(19):
- Arora, P., Dongre, S., Raman, R., Sonawane, M. (2020) Stepwise polarisation of developing bilayered epidermis is mediated by aPKC and E-cadherin in zebrafish. eLIFE. 9:
- Hao, Y., Zhou, Y., Yu, Y., Zheng, M., Weng, K., Kou, Z., Liang, J., Zhang, Q., Tang, X., Xu, P., Link, B.A., Yao, K., Zou, J. (2020) Interplay of MPP5a with Rab11 synergistically builds epithelial apical polarity and zonula adherens. Development (Cambridge, England). 147(22):
- Kujawski, S., Crespo, C., Luz, M., Yuan, M., Winkler, S., Knust, E. (2020) Loss of Crb2b-lf leads to anterior segment defects in old zebrafish. Biology Open. 9(2):
- Saddala, M.S., Lennikov, A., Bouras, A., Huang, H. (2020) RNA-Seq reveals differential expression profiles and functional annotation of genes involved in retinal degeneration in Pde6c mutant Danio rerio. BMC Genomics. 21:132
- Magre, I., Fandade, V., Damle, I., Banerjee, P., Yadav, S.K., Sonawane, M., Joseph, J. (2019) Nup358 regulates microridge length by controlling SUMOylation-dependent activity of aPKC in zebrafish epidermis. Journal of Cell Science. 132(12):
- Bayés, À., Collins, M.O., Reig-Viader, R., Gou, G., Goulding, D., Izquierdo, A., Choudhary, J.S., Emes, R.D., Grant, S.G. (2017) Evolution of complexity in the zebrafish synapse proteome. Nature communications. 8:14613
- Hudish, L.I., Galati, D.F., Ravanelli, A.M., Pearson, C.G., Huang, P., Appel, B. (2016) miR-219 regulates neural progenitors by dampening apical Par protein-dependent Hedgehog signaling. Development (Cambridge, England). 143(13):2292-304
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