Genomic Feature

wk5

ID
ZDB-ALT-240412-1
Name
wk5
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Choe Lab
Current Source
Other Pages
Notes
Comment Citation
Most homozygotes die before 30 days post-fertilization. Bhandari et al., 2023
Genome Browser
Genome Browsers
Variants
Variant Type
Small Deletion
Variant Location
Chr 16: 12444958 - 12444965 (GRCz12tu) (1) Details
Nucleotide Change
TTGGGTCA/-
Variant Notes
The mutation is predicted to result in a severely truncated protein of only 41  ...
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
8 bp deleted (1)
Transcript Consequence
None
Protein Consequence
Polypeptide Truncation (1)
Sequences
Flanking Sequence
AAATAAAATGTCATACTAAGTGAAATAATATTCCATCAATCAACAAAACAGATATATTTAAGCAAAATAAAAAAACTAATTTACACCTGTACTTTAAAAAATACATATAAAAGAATAAGAGTGATCATACTTAATGTTCTTTAAAATGATTCAAAACTGCTGTCAAATAGGTATAGTGGCAAAGCATAAAGACTTAAAAGGAGAACTGACTAACATTTTGGAGCTGCACTGTGATGCTTAAATATGCCTGACAAGCTTATTTTGTTATATAAACTACTATCTTGCATAAATCAGGCTAAAATGATTCTCATTCCAATGAATGAGCTTAAGCTTTTGATGCTTGAAAACACCTTTTCATCTCTGATCCATTTACATAACCAATGTCACCAAATATATCAGCACATCGTTTGGTCTCAGCCCTTAACATGTAGTCATGATTACAAAAATAAGGTTTTGTAACTTACAGTGGGCGTTGATCGATGTCTCCAAGCCCCGCCCTC
TTGGGTCA/- TGTGACCAGTCAGTTTCATGAGGGGATTGGCTCCCCCACATTCCGCCTCCACTAACTCCCGCATCGCCATGGTAACACACCCTCAGGCTGGATCAAACTAGCACCTTAAGATATCTACAAGTAAATGAAACATCATCACTGAGTGGTATGGAAGTTGTTAAAAATGTGACATTAAAAGTTTAAAACAGTCTGGGACCTTTTTAAATCTTTTTACCAATCCCAAACCATTGGGATAATGGCATTCTGGAATATTTTCATGTTTCACACTGCTCTTAATTTACCCAGGGTTAACAAATAGTCCTGAATATGAAGGAGCAGCCTAAATCTTTAAACTGGGTCAATGTTCTTCTTCATTTTATTATGAAAACACAGCATACAACCAGTTTAAATAAATGCTCTACCATCCTCATATTATATACTGCTGACTGCAACTCTCTCTATCCTGAGTGGACTTTTCATGAAACTGTCTCCTATATTTACTGCAACTCTTGCATTTGCAT
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations
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