PUBLICATION

Deficiency in class III PI3-kinase confers postnatal lethality with IBD-like features in zebrafish

Authors
Zhao, S., Xia, J., Wu, X., Zhang, L., Wang, P., Wang, H., Li, H., Wang, X., Chen, Y., Agnetti, J., Li, Y., Pei, D., Shu, X.
ID
ZDB-PUB-180708-1
Date
2018
Source
Nature communications   9: 2639 (Journal)
Registered Authors
Shu, Xiaodong
Keywords
none
Datasets
GEO:GSE102032
MeSH Terms
  • Inflammatory Bowel Diseases/enzymology*
  • Inflammatory Bowel Diseases/pathology*
  • Mice
  • Inflammation/pathology
  • Gene Expression Regulation, Developmental
  • Disease Models, Animal
  • Phosphatidylinositol 3-Kinase/deficiency*
  • Phosphatidylinositol 3-Kinase/metabolism
  • Enterocytes/pathology
  • Enterocytes/ultrastructure
  • Gastrointestinal Tract/pathology
  • Cell Polarity
  • Zebrafish/embryology
  • Zebrafish/genetics
  • Zebrafish/metabolism*
  • Cadherins/metabolism
  • Phosphatidylinositol Phosphates/metabolism
  • Gastrointestinal Microbiome
  • Larva/metabolism
  • Larva/ultrastructure
  • Embryo, Nonmammalian/metabolism
  • Embryo, Nonmammalian/pathology
  • Mutation/genetics
  • Animals
  • Animals, Newborn
  • Endocytosis
(all 26)
PubMed
29980668 Full text @ Nat. Commun.
Abstract
The class III PI3-kinase (PIK3C3) is an enzyme responsible for the generation of phosphatidylinositol 3-phosphate (PI3P), a critical component of vesicular membrane. Here, we report that PIK3C3 deficiency in zebrafish results in intestinal injury and inflammation. In pik3c3 mutants, gut tube forms but fails to be maintained. Gene expression analysis reveals that barrier-function-related inflammatory bowel disease (IBD) susceptibility genes (e-cadherin, hnf4a, ttc7a) are suppressed, while inflammatory response genes are stimulated in the mutants. Histological analysis shows neutrophil infiltration into mutant intestinal epithelium and the clearance of gut microbiota. Yet, gut microorganisms appear dispensable as mutants cultured under germ-free condition have similar intestinal defects. Mechanistically, we show that PIK3C3 deficiency suppresses the formation of PI3P and disrupts the polarized distribution of cell-junction proteins in intestinal epithelial cells. These results not only reveal a role of PIK3C3 in gut homeostasis, but also provide a zebrafish IBD model.
Genes / Markers
Figures
Figure Gallery (9 images)
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Expression
Phenotype
Mutations / Transgenics
Allele Construct Type Affected Genomic Region
ihb20TgTransgenic Insertion
    rj30TgTransgenic Insertion
      zf2159TgTransgenic Insertion
        zf2160
          Indel
          zf2161
            Small Deletion
            1 - 5 of 5
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            Human Disease / Model
            Sequence Targeting Reagents
            Target Reagent Reagent Type
            pik3c3CRISPR1-pik3c3CRISPR
            1 - 1 of 1
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            Fish
            Antibodies
            Orthology
            No data available
            Engineered Foreign Genes
            Marker Marker Type Name
            EGFPEFGEGFP
            FYVEEFGFYVE
            1 - 2 of 2
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            Mapping
            No data available