Gene

nog3

ID
ZDB-GENE-990714-8
Name
noggin 3
Symbol
nog3 Nomenclature History
Previous Names
  • zNog3
  • noggin
Type
protein_coding_gene
Location
Chr: 12 Mapping Details/Browsers
Description
Acts upstream of or within several processes, including cloaca development; embryonic viscerocranium morphogenesis; and regionalization. Predicted to be located in extracellular region. Predicted to be active in extracellular space. Is expressed in cartilage element; fin; head; and otic vesicle. Human ortholog(s) of this gene implicated in Huntington's disease; bone disease (multiple); cleft lip; and hyperopia. Orthologous to human NOG (noggin).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
12 figures from 7 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
1 Figure from Ning et al., 2013
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
No data available
Sequence Targeting Reagents
Targeting Reagent Created Alleles Citations
MO1-nog3N/ANing et al., 2013
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Human Disease
Associated With nog3 Human Ortholog
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
brachydactyly type B2 Alliance Brachydactyly, type B2 611377
multiple synostoses syndrome 1 Alliance Multiple synostoses syndrome 1 186500
proximal symphalangism 1 Alliance Symphalangism, proximal, 1A 185800
tarsal-carpal coalition syndrome Alliance Tarsal-carpal coalition syndrome 186570
Stapes ankylosis with broad thumbs and toes 184460
1 - 5 of 5
Associated With nog3 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Family IPR008717 Noggin
Homologous_superfamily IPR029034 Cystine-knot cytokine
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Domain Details Per Protein
Protein Additional Resources Length Cystine-knot cytokine Noggin
UniProtKB:Q9YHV3 InterPro 223
1 - 1 of 1
Transcripts
Genome Browsers
Genome Build: GRCz11Chromosome: 12
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA nog3-001 (1) Havana 918 nt
mRNA nog3-201 (1) Ensembl 1,585 nt
1 - 2 of 2
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Construct Regulatory Region Coding Sequence Species Tg Lines Citations
Tg(hsp70l:nog3)
  • nog3
  • Danio rerio
1 (28)
Tg(-5.5nkx2.3:nog3-mCherry)
  • Danio rerio
1Zebrafish Nomenclature Committee
Tg(hsp70l:nog3-FLAG,myl7:NLS-mCherry)
  • Danio rerio
1Nakajima et al., 2023
1 - 3 of 3
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Marker Relationships
Relationship Marker Type Marker Accession Numbers Citations
Contained inBACCH211-199H23ZFIN Curated Data
Contained inBACDKEY-33G13ZFIN Curated Data
Contained inPACBUSM1-64D20
EncodesESTeu301Thisse et al., 2005
EncodescDNAMGC:194270ZFIN Curated Data
EncodescDNAMGC:194310ZFIN Curated Data
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Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Species Symbol Chromosome Accession # Evidence
HumanNOG17
Conserved genome location (synteny) (1)
Amino acid sequence comparison (1)
Citations
1 - 10 of 49
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