Gene

myca

ID
ZDB-GENE-990415-162
Name
MYC proto-oncogene, bHLH transcription factor a
Symbol
myca Nomenclature History
Previous Names
  • c-myc (1)
  • cmyc
  • cmyca
  • C-Myc1 (1)
  • zc-myc (1)
Type
protein_coding_gene
Location
Chr: 24 Mapping Details/Browsers
Description
Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Acts upstream of or within hematopoietic stem cell differentiation; regulation of vasculature development; and vasculature development. Predicted to be located in nucleus. Is expressed in several structures, including digestive system; immature eye; nervous system; neural tube; and pronephros. Human ortholog(s) of this gene implicated in several diseases, including angiosarcoma; carcinoma (multiple); demyelinating disease; hematologic cancer (multiple); and prostate cancer (multiple). Orthologous to human MYC (MYC proto-oncogene, bHLH transcription factor).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
75 figures from 58 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
1 Figure from Shi et al., 2014
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Allele Type Localization Consequence Mutagen Supplier
nju52Allele with one insertionExon 2UnknownCRISPR
uf2Allele with one deletionExon 2Frameshift, Premature StopCRISPR
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Sequence Targeting Reagents
Targeting Reagent Created Alleles Citations
CRISPR1-mycaYakulov et al., 2018
MO1-mycaN/A (2)
MO2-mycaN/A (2)
MO3-mycaN/AMitra et al., 2019
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Human Disease
Associated With myca Human Ortholog
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
Burkitt lymphoma Alliance Burkitt lymphoma, somatic 113970
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Associated With myca Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR003327 Leucine zipper, Myc
Domain IPR011598 Myc-type, basic helix-loop-helix (bHLH) domain
Domain IPR012682 Transcription regulator Myc, N-terminal
Family IPR002418 Transcription regulator Myc
Family IPR050433 Myc family transcription factors
1 - 5 of 6 Show all
Domain Details Per Protein
Protein Additional Resources Length Helix-loop-helix DNA-binding domain superfamily Leucine zipper, Myc Myc family transcription factors Myc-type, basic helix-loop-helix (bHLH) domain Transcription regulator Myc Transcription regulator Myc, N-terminal
UniProtKB:P52160 InterPro 419
1 - 1 of 1
Transcripts
Genome Browsers
Genome Build: GRCz11Chromosome: 24
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA myca-201 (1) Ensembl 1,864 nt
mRNA myca-202 (1) Ensembl 1,872 nt
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Interactions and Pathways
Antibodies
No data available
Plasmids
No data available
Constructs
1 - 3 of 3
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Marker Relationships
Relationship Marker Type Marker Accession Numbers Citations
Contained inBACCH211-69L10ZFIN Curated Data
EncodesESTfc77a09ZFIN Curated Data
EncodescDNAMGC:64149ZFIN Curated Data
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Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Species Symbol Chromosome Accession # Evidence
HumanMYC8
Amino acid sequence comparison (7)
MouseMyc15
Amino acid sequence comparison (6)
Citations
1 - 10 of 171
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