Gene

her4.1

ID
ZDB-GENE-980526-521
Name
hairy-related 4, tandem duplicate 1
Symbol
her4.1 Nomenclature History
Previous Names
  • her4
  • Hes5e (1)
  • ch73-21g5.2 (1)
  • wu:fe18g04 (1)
  • wu:fq41c06 (1)
  • zgc:55218
Type
protein_coding_gene
Location
Chr: 23 Mapping Details/Browsers
Description
Enables double-stranded DNA binding activity. Acts upstream of or within several processes, including Notch signaling pathway; nervous system development; and somite specification. Predicted to be active in nucleus. Is expressed in several structures, including anterior neural rod; embryonic structure; nervous system; neural keel; and segmental plate.
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
117 figures from 73 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
No data available
Sequence Targeting Reagents
Targeting Reagent Created Alleles Citations
MO1-her4N/A (4)
MO2-her4N/A (3)
MO3-her4N/AHenry et al., 2002
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Human Disease
Associated With her4.1 Human Ortholog
No data available
Associated With her4.1 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR003650 Orange domain
Domain IPR011598 Myc-type, basic helix-loop-helix (bHLH) domain
Family IPR050370 Hairy and Enhancer of Split/HEY-related
Homologous_superfamily IPR036638 Helix-loop-helix DNA-binding domain superfamily
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Domain Details Per Protein
Protein Additional Resources Length Hairy and Enhancer of Split/HEY-related Helix-loop-helix DNA-binding domain superfamily Myc-type, basic helix-loop-helix (bHLH) domain Orange domain
UniProtKB:Q90466 InterPro 152
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Transcripts
Genome Browsers
Genome Build: GRCz11Chromosome: 23
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA her4.1-201 (1) Ensembl 963 nt
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Interactions and Pathways
Antibodies
No data available
Plasmids
No data available
Constructs
1 - 10 of 12
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Marker Relationships
Relationship Marker Type Marker Accession Numbers Citations
Contained inBACCH73-21G5ZFIN Curated Data
EncodesESTbn0aa072zb08
    ZFIN Curated Data
    EncodesESTfq41c06Rauch et al., 2003
    EncodescDNAMGC:173865ZFIN Curated Data
    EncodescDNAMGC:192073ZFIN Curated Data
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    Sequences
    Orthology
    Comparative Orthology
    Alliance
    Gene Tree
    Ensembl
    Species Symbol Chromosome Accession # Evidence
    MouseHes54
    Amino acid sequence comparison (1)
    Citations
    1 - 10 of 150
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