ZFIN is now using GRCz12tu for Genomic Data
Gene
egln1a
- ID
- ZDB-GENE-110408-34
- Name
- egl-9 family hypoxia-inducible factor 1a
- Symbol
- egln1a Nomenclature History
- Previous Names
-
- si:ch1073-423n4.1 (1)
- Type
- protein_coding_gene
- Location
- Chr: 13 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable ferrous iron binding activity and peptidyl-proline 4-dioxygenase activity. Acts upstream of or within nucleate erythrocyte development. Predicted to be active in cytoplasm and nucleus. Is expressed in brain; eye; liver; muscle; and pleuroperitoneal region. Human ortholog(s) of this gene implicated in familial erythrocytosis 3; polycythemia; and renal cell carcinoma. Orthologous to human EGLN1 (egl-9 family hypoxia inducible factor 1).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 1 figure from Dou et al., 2024
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- 4 figures from Dou et al., 2024
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
| Disease Ontology Term | Multi-Species Data | OMIM Term | OMIM Phenotype ID |
|---|---|---|---|
| familial erythrocytosis 3 | Alliance | Erythrocytosis, familial, 3 | 609820 |
| [Hemoglobin, high altitude adaptation] | 609070 |
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Domain | IPR002893 | Zinc finger, MYND-type |
| Domain | IPR005123 | Oxoglutarate/iron-dependent dioxygenase domain |
| Domain | IPR006620 | Prolyl 4-hydroxylase, alpha subunit |
| Domain | IPR044862 | Prolyl 4-hydroxylase alpha subunit, Fe(2+) 2OG dioxygenase domain |
| Family | IPR051559 | Hypoxia-inducible factor prolyl hydroxylases |
Domain Details Per Protein
| Protein | Additional Resources | Length | Hypoxia-inducible factor prolyl hydroxylases | Oxoglutarate/iron-dependent dioxygenase domain | Prolyl 4-hydroxylase, alpha subunit | Prolyl 4-hydroxylase alpha subunit, Fe(2+) 2OG dioxygenase domain | Zinc finger, MYND-type |
|---|---|---|---|---|---|---|---|
| UniProtKB:A0A8M3B5J3 | InterPro | 288 | |||||
| UniProtKB:E7F518 | InterPro | 328 | |||||
| UniProtKB:A0AB32T247 | InterPro | 290 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
egln1a-201
(1)
|
Ensembl | 991 nt | ||
| mRNA |
egln1a-202
(1)
|
Ensembl | 1,343 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers