Gene

col27a1a

ID
ZDB-GENE-100119-1
Name
collagen, type XXVII, alpha 1a
Symbol
col27a1a Nomenclature History
Previous Names
  • cb221 (1)
  • sb:cb221
Type
protein_coding_gene
Location
Unmapped
Description
Predicted to be an extracellular matrix structural constituent conferring tensile strength. Acts upstream of or within bone mineralization; notochord morphogenesis; and skeletal system development. Predicted to be active in extracellular matrix. Is expressed in several structures, including hypochord; mesoderm; periderm; pronephric duct; and skeletal system. Orthologous to human COL27A1 (collagen type XXVII alpha 1 chain).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
14 figures from 7 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
3 figures from Christiansen et al., 2009
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With col27a1a Human Ortholog
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
Steel syndrome 615155
1 - 1 of 1
Associated With col27a1a Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR000885 Fibrillar collagen, C-terminal
Domain IPR001791 Laminin G domain
Domain IPR048287 Thrombospondin-like, N-terminal domain
Family IPR050938 Collagen and Collagen-like Structural Proteins
Homologous_superfamily IPR013320 Concanavalin A-like lectin/glucanase domain superfamily
1 - 5 of 6 Show all
Domain Details Per Protein
Protein Additional Resources Length Collagen and Collagen-like Structural Proteins Collagen triple helix repeat Concanavalin A-like lectin/glucanase domain superfamily Fibrillar collagen, C-terminal Laminin G domain Thrombospondin-like, N-terminal domain
UniProtKB:C7DZK3 InterPro 1783
1 - 1 of 1
Transcripts
Genome Browsers
No data available
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Citations
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