Gene

cntnap5a

ID
ZDB-GENE-081105-126
Name
contactin associated protein family member 5a
Symbol
cntnap5a Nomenclature History
Previous Names
  • si:dkey-155f10.1 (1)
Type
protein_coding_gene
Location
Chr: 9 Mapping Details/Browsers
Description
Acts upstream of or within retina homeostasis. Predicted to be located in membrane. Orthologous to human CNTNAP5 (contactin associated protein family member 5).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
No data available
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Allele Type Localization Consequence Mutagen Supplier
la029562TgTransgenic insertionUnknownUnknownDNA
sa21481Allele with one point mutationUnknownPremature StopENU
sa21482Allele with one point mutationUnknownSplice SiteENU
sa21483Allele with one point mutationUnknownSplice SiteENU
sa27395Allele with one point mutationUnknownSplice SiteENU
sa31711Allele with one point mutationUnknownSplice SiteENU
sa34635Allele with one point mutationUnknownPremature StopENU
sa41413Allele with one point mutationUnknownPremature StopENU
sa45356Allele with one point mutationUnknownSplice SiteENU
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Sequence Targeting Reagents
Targeting Reagent Created Alleles Citations
CRISPR1-cntnap5a
    (2)
    MO1-cntnap5aN/AChakraborty et al., 2024
    1 - 2 of 2
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    Human Disease
    Associated With cntnap5a Human Ortholog
    No data available
    Associated With cntnap5a Via Experimental Models
    No data available
    Gene Ontology
    Protein Domains
    Domain, Family, and Site Summary
    Type InterPro ID Name
    Domain IPR000421 Coagulation factor 5/8, C-terminal domain
    Domain IPR000742 EGF-like domain
    Domain IPR001791 Laminin G domain
    Domain IPR002181 Fibrinogen, alpha/beta/gamma chain, C-terminal globular domain
    Family IPR050372 Neurexin-related cell adhesion and synaptic protein
    1 - 5 of 8 Show all
    Domain Details Per Protein
    Protein Additional Resources Length Coagulation factor 5/8, C-terminal domain Concanavalin A-like lectin/glucanase domain superfamily EGF-like domain Fibrinogen, alpha/beta/gamma chain, C-terminal globular domain Fibrinogen-like, C-terminal Galactose-binding-like domain superfamily Laminin G domain Neurexin-related cell adhesion and synaptic protein
    UniProtKB:A0A8M3AW13 InterPro 1306
    UniProtKB:A0A8M3BCG4 InterPro 747
    UniProtKB:A0A8M9PLE3 InterPro 1306
    UniProtKB:A0AB32TXX5 InterPro 1233
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    Transcripts
    Genome Browsers
    Genome Build: GRCz11Chromosome: 9
    Type Name Annotation Method Has Havana Data Length (nt) Analysis
    mRNA cntnap5a-201 (1) Ensembl 4,122 nt
    mRNA cntnap5a-202 (1) Ensembl 3,839 nt
    ncRNA cntnap5a-002 (1) Ensembl 540 nt
    ncRNA cntnap5a-003 (1) Ensembl 621 nt
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    Interactions and Pathways
    No data available
    Antibodies
    No data available
    Plasmids
    No data available
    Constructs
    No data available
    Marker Relationships
    Relationship Marker Type Marker Accession Numbers Citations
    Contained inBACDKEY-155F10ZFIN Curated Data
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    Sequences
    Orthology
    Comparative Orthology
    Alliance
    Gene Tree
    Ensembl
    Species Symbol Chromosome Accession # Evidence
    HumanCNTNAP52
    Conserved genome location (synteny) (1)
    Amino acid sequence comparison (1)
    Citations
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