Gene
sfi1
- ID
- ZDB-GENE-080206-4
- Name
- SFI1 centrin binding protein
- Symbol
- sfi1 Nomenclature History
- Previous Names
- None
- Type
- protein_coding_gene
- Location
- Chr: 6 Mapping Details/Browsers
- Description
- Predicted to enable phosphatase binding activity. Is expressed in head. Orthologous to human SFI1 (SFI1 centrin binding protein).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 1 figure from Li et al., 2021
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
| Allele | Type | Localization | Consequence | Mutagen | Supplier |
|---|---|---|---|---|---|
| sa2293 | Allele with one point mutation | Unknown | Premature Stop | ENU | |
| sa5754 | Allele with one point mutation | Unknown | Premature Stop | ENU | |
| sa20782 | Allele with one point mutation | Unknown | Premature Stop | ENU | |
| sa20783 | Allele with one point mutation | Unknown | Splice Site | ENU | |
| sa33925 | Allele with one point mutation | Unknown | Premature Stop | ENU | |
| sa33926 | Allele with one point mutation | Unknown | Premature Stop | ENU | |
| sa40765 | Allele with one point mutation | Unknown | Premature Stop | ENU |
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No data available
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Family | IPR052270 | Centrosome-associated contractile fiber protein |
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Domain Details Per Protein
| Protein | Additional Resources | Length | Centrosome-associated contractile fiber protein |
|---|---|---|---|
| UniProtKB:F1QNA2 | InterPro | 1205 |
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Interactions and Pathways
No data available
Plasmids
No data available
No data available
| Relationship | Marker Type | Marker | Accession Numbers | Citations |
|---|---|---|---|---|
| Contained in | BAC | CH211-13J1 | ZFIN Curated Data |
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| Type | Accession # | Sequence | Length (nt/aa) | Analysis |
|---|---|---|---|---|
| RNA | RefSeq:XM_683537 (1) | 3986 nt | ||
| Genomic | GenBank:CR293534 (1) | 109426 nt | ||
| Polypeptide | UniProtKB:F1QNA2 (1) | 1205 aa |
- Li, J., Liu, F., Lv, Y., Sun, K., Zhao, Y., Reilly, J., Zhang, Y., Tu, J., Yu, S., Liu, X., Qin, Y., Huang, Y., Gao, P., Jia, D., Chen, X., Han, Y., Shu, X., Luo, D., Tang, Z., Liu, M. (2021) Prpf31 is essential for the survival and differentiation of retinal progenitor cells by modulating alternative splicing. Nucleic acids research. 49(4):2027-2043
- Elkon, R., Milon, B., Morrison, L., Shah, M., Vijayakumar, S., Racherla, M., Leitch, C.C., Silipino, L., Hadi, S., Weiss-Gayet, M., Barras, E., Schmid, C.D., Ait-Lounis, A., Barnes, A., Song, Y., Eisenman, D.J., Eliyahu, E., Frolenkov, G.I., Strome, S.E., Durand, B., Zaghloul, N.A., Jones, S.M., Reith, W., Hertzano, R. (2015) RFX transcription factors are essential for hearing in mice. Nature communications. 6:8549
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