Gene
ankrd55
- ID
- ZDB-GENE-080104-7
- Name
- ankyrin repeat domain 55
- Symbol
- ankrd55 Nomenclature History
- Previous Names
- None
- Type
- protein_coding_gene
- Location
- Chr: 10 Mapping Details/Browsers
- Description
- Acts upstream of or within glucose homeostasis and type B pancreatic cell development. Orthologous to human ANKRD55 (ankyrin repeat domain 55).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 1 figure from O'Hare et al., 2016
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- 4 figures from O'Hare et al., 2016
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
| Allele | Type | Localization | Consequence | Mutagen | Supplier |
|---|---|---|---|---|---|
| sa16616 | Allele with one point mutation | Unknown | Splice Site | ENU | |
| sa16758 | Allele with one point mutation | Unknown | Splice Site | ENU | |
| sa17099 | Allele with one point mutation | Unknown | Premature Stop | ENU | |
| sa18027 | Allele with one point mutation | Unknown | Splice Site | ENU | |
| sa34844 | Allele with one point mutation | Unknown | Splice Site | ENU |
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Human Disease
Domain, Family, and Site Summary
Domain Details Per Protein
| Protein | Additional Resources | Length | Ankyrin repeat | Ankyrin repeat-containing domain superfamily |
|---|---|---|---|---|
| UniProtKB:A0A0R4IBH3 | InterPro | 650 | ||
| UniProtKB:A0A8M1PT06 | InterPro | 651 |
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| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
ankrd55-201
(1)
|
Ensembl | 2,420 nt | ||
| mRNA |
ankrd55-202
(1)
|
Ensembl | 2,275 nt | ||
| mRNA |
ankrd55-203
(1)
|
Ensembl | 1,896 nt |
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Interactions and Pathways
No data available
Plasmids
No data available
No data available
| Relationship | Marker Type | Marker | Accession Numbers | Citations |
|---|---|---|---|---|
| Contained in | BAC | CH211-193A15 | ||
| Contained in | BAC | CH211-281K19 |
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| Type | Accession # | Sequence | Length (nt/aa) | Analysis |
|---|---|---|---|---|
| RNA | RefSeq:XM_001345383 (1) | 2430 nt | ||
| Genomic | GenBank:AL954770 (1) | 151426 nt | ||
| Polypeptide | UniProtKB:A0A8M1PT06 (1) | 651 aa |
- O'Hare, E.A., Yerges-Armstrong, L.M., Perry, J.A., Shuldiner, A.R., Zaghloul, N.A. (2016) Assignment of Functional Relevance to Genes at Type 2 Diabetes-Associated Loci Through Investigation of β-Cell Mass Deficits. Molecular endocrinology (Baltimore, Md.). 30(4):429-45
- Liongue, C., and Ward, A.C. (2007) Evolution of Class I cytokine receptors. BMC Evolutionary Biology. 7(1):120
- Lo, J., Lee, S., Xu, M., Liu, F., Ruan, H., Eun, A., He, Y., Ma, W., Wang, W., Wen, Z., and Peng, J. (2003) 15,000 unique zebrafish EST clusters and their future use in microarray for profiling gene expression patterns during embryogenesis. Genome research. 13(3):455-466
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