Gene
fer1l6
- ID
- ZDB-GENE-070912-312
- Name
- fer-1 like family member 6
- Symbol
- fer1l6 Nomenclature History
- Previous Names
-
- si:ch211-67e16.5 (1)
- Type
- protein_coding_gene
- Location
- Chr: 9 Mapping Details/Browsers
- Description
- Predicted to enable calcium-dependent phospholipid binding activity. Involved in cardiac muscle tissue development and skeletal muscle tissue development. Predicted to be located in several cellular components, including perinuclear region of cytoplasm; recycling endosome; and trans-Golgi network. Is expressed in several structures, including gill; gonad; heart; integument; and muscle. Orthologous to human FER1L6 (fer-1 like family member 6).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 2 figures from Bonventre et al., 2018
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- 5 figures from Bonventre et al., 2018
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
| Allele | Type | Localization | Consequence | Mutagen | Supplier |
|---|---|---|---|---|---|
| sa2511 | Allele with one point mutation | Unknown | Premature Stop | ENU | |
| sa6110 | Allele with one point mutation | Unknown | Splice Site | ENU | |
| sa10809 | Allele with one point mutation | Unknown | Premature Stop | ENU | |
| sa11129 | Allele with one point mutation | Unknown | Premature Stop | ENU | |
| sa16199 | Allele with one point mutation | Unknown | Premature Stop | ENU | |
| sa18941 | Allele with one point mutation | Unknown | Premature Stop | ENU | |
| sa27362 | Allele with one point mutation | Unknown | Splice Site | ENU | |
| sa34585 | Allele with one point mutation | Unknown | Splice Site | ENU | |
| sa34586 | Allele with one point mutation | Unknown | Premature Stop | ENU | |
| sa34587 | Allele with one point mutation | Unknown | Splice Site | ENU |
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| Targeting Reagent | Created Alleles | Citations |
|---|---|---|
| MO1-fer1l6 | N/A | Bonventre et al., 2018 |
| MO2-fer1l6 | N/A | Bonventre et al., 2018 |
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Human Disease
Domain, Family, and Site Summary
Domain Details Per Protein
| Protein | Additional Resources | Length | C2 domain | C2 domain superfamily | FerIin domain | Ferlin B-domain | Ferlin, C-terminal domain | Ferlin, dsRNA-binding domain-like domain | Ferlin family | Ferlin, fifth C2 domain | Ferlin, fourth C2 domain | Ferlin, second C2 domain | Ferlin, sixth C2 domain | Ferlin, third C2 domain |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| UniProtKB:A0A8M9QAZ7 | InterPro | 1830 | ||||||||||||
| UniProtKB:A0AB32U0R8 | InterPro | 1810 | ||||||||||||
| UniProtKB:A0AB32U1U0 | InterPro | 1806 | ||||||||||||
| UniProtKB:A0AB32U2W5 | InterPro | 1821 |
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| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
fer1l6-201
(1)
|
Ensembl | 5,373 nt | ||
| mRNA |
fer1l6-202
(1)
|
Ensembl | 156 nt | ||
| mRNA |
fer1l6-203
(1)
|
Ensembl | 965 nt | ||
| mRNA |
fer1l6-204
(1)
|
Ensembl | 1,101 nt | ||
| mRNA |
fer1l6-205
(1)
|
Ensembl | 1,731 nt |
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Interactions and Pathways
No data available
Plasmids
No data available
No data available
| Relationship | Marker Type | Marker | Accession Numbers | Citations |
|---|---|---|---|---|
| Contained in | BAC | CH211-67E16 | ZFIN Curated Data |
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| Type | Accession # | Sequence | Length (nt/aa) | Analysis |
|---|---|---|---|---|
| RNA | RefSeq:XM_068223564 (1) | 8299 nt | ||
| Genomic | GenBank:AL929266 (1) | 199104 nt | ||
| Polypeptide | UniProtKB:A0A8M9QAZ7 (1) | 1830 aa |