Gene
s100a11
- ID
- ZDB-GENE-070717-5
- Name
- S100 calcium binding protein A11
- Symbol
- s100a11 Nomenclature History
- Previous Names
-
- si:dkey-105n5.1
- Type
- protein_coding_gene
- Location
- Chr: 19 Mapping Details/Browsers
- Description
- Predicted to enable calcium ion binding activity and calcium-dependent protein binding activity. Predicted to be active in extracellular space and perinuclear region of cytoplasm. Is expressed in gill; hematopoietic system; integument; olfactory epithelium; and pericardium. Orthologous to human S100A11 (S100 calcium binding protein A11).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 7 figures from 3 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
No data available
No data available
Human Disease
Domain, Family, and Site Summary
Domain Details Per Protein
Protein | Additional Resources | Length | EF-Hand 1, calcium-binding site | EF-hand domain | EF-hand domain pair | S-100 | S100/CaBP-9k-type, calcium binding, subdomain |
---|---|---|---|---|---|---|---|
UniProtKB:A5WW28 | InterPro | 85 |
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Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
---|---|---|---|---|---|
mRNA |
s100a11-201
(1)
|
Ensembl | 462 nt |
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Interactions and Pathways
No data available
Plasmids
No data available
No data available
Relationship | Marker Type | Marker | Accession Numbers | Citations |
---|---|---|---|---|
Contained in | BAC | DKEY-105N5 | ZFIN Curated Data |
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Type | Accession # | Sequence | Length (nt/aa) | Analysis |
---|---|---|---|---|
RNA | RefSeq:NM_001282183 (1) | 468 nt | ||
Genomic | GenBank:CT573133 (1) | 59492 nt | ||
Polypeptide | UniProtKB:A5WW28 (1) | 85 aa |
- Jia, S., Wu, X., Wu, Y., Cui, X., Tao, B., Zhu, Z., Hu, W. (2020) Multiple Developmental Defects in sox11a Mutant Zebrafish with Features of Coffin-Siris Syndrome. International journal of biological sciences. 16:3039-3049
- Zhang, C., Zhang, Q., Wang, J., Tian, J., Song, Y., Xie, H., Chang, M., Nie, P., Gao, Q., Zou, J. (2019) Transcriptomic responses of S100 family to bacterial and viral infection in zebrafish. Fish & shellfish immunology. 94:685-696
- Ortiz-Villanueva, E., Navarro-Martín, L., Jaumot, J., Benavente, F., Sanz-Nebot, V., Piña, B., Tauler, R. (2017) Metabolic disruption of zebrafish (Danio rerio) embryos by bisphenol A. An integrated metabolomic and transcriptomic approach. Environmental pollution (Barking, Essex : 1987). 231:22-36
- Xiao, B., Chen, T.M., Zhong, Y. (2016) Possible molecular mechanism underlying cadmium-induced circadian rhythms disruption in zebrafish. Biochemical and Biophysical Research Communications. 481(3-4):201-205
- Kraemer, A.M., Saraiva, L.R., and Korsching, S.I. (2008) Structural and functional diversification in the teleost S100 family of calcium-binding proteins. BMC Evolutionary Biology. 8:48
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