Gene

ift70

ID
ZDB-GENE-070117-2066
Name
intraflagellar transport 70
Symbol
ift70 Nomenclature History
Previous Names
  • flr (1)
  • IFT70 (1)
  • DYF-1 (1)
Type
protein_coding_gene
Location
Chr: 3 Mapping Details/Browsers
Description
Enables tubulin-glycine ligase activity. Involved in intraciliary transport and protein polyglutamylation. Acts upstream of or within several processes, including cilium assembly; determination of left/right symmetry; and opsin transport. Located in axonemal microtubule and motile cilium. Is expressed in Kupffer's vesicle; lateral mesoderm; nervous system; and pronephros. Orthologous to human IFT70A (intraflagellar transport 70A) and IFT70B (intraflagellar transport 70B).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
5 figures from 2 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
18 figures from 8 publications
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Allele Type Localization Consequence Mutagen Supplier
la028891TgTransgenic insertionUnknownUnknownDNA
m477Allele with one point mutationUnknownPremature StopENU
sa40077Allele with one point mutationUnknownMissense, Premature StopENU
tpl19GtTransgenic insertionIntron 1UnknownDNA
tpl19RGtTransgenic insertionUnknownUnknownDNA
tpl141TgTransgenic insertionUnknownUnknownDNA and CRISPR
zf359Allele with one point mutationUnknownUnknownnot specified
1 - 7 of 7
Show
Sequence Targeting Reagents
Targeting Reagent Created Alleles Citations
CRISPR1-ift70Burg et al., 2018
MO1-ift70N/A (2)
MO2-ift70N/APathak et al., 2007
1 - 3 of 3
Show
Human Disease
Associated With ift70 Human Ortholog
No data available
Associated With ift70 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Family IPR039941 Tetratricopeptide repeat protein 30
Homologous_superfamily IPR011990 Tetratricopeptide-like helical domain superfamily
Homologous_superfamily IPR036723 Alpha-catenin/vinculin-like superfamily
Repeat IPR013105 Tetratricopeptide repeat 2
Repeat IPR019734 Tetratricopeptide repeat
1 - 5 of 5
Domain Details Per Protein
Protein Additional Resources Length Alpha-catenin/vinculin-like superfamily Tetratricopeptide-like helical domain superfamily Tetratricopeptide repeat Tetratricopeptide repeat 2 Tetratricopeptide repeat protein 30
UniProtKB:A7YE96 InterPro 651
UniProtKB:A0A8M9PR90 InterPro 575
UniProtKB:A0A8M9P934 InterPro 645
UniProtKB:A0A8M9PYI9 InterPro 667
1 - 4 of 4
Transcripts
Genome Browsers
Genome Build: GRCz11Chromosome: 3
Type Name Annotation Method Has Havana Data Length (nt) Analysis
aberrant processed transcript flr-202 (1) Ensembl 2,015 nt
mRNA flr-201 (1) Ensembl 2,559 nt
mRNA flr-204 (1) Ensembl 2,004 nt
mRNA flr-205 (1) Ensembl 5,437 nt
ncRNA flr-003 (1) Ensembl 575 nt
1 - 5 of 5
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
No data available
Marker Relationships
Relationship Marker Type Marker Accession Numbers Citations
Contained inBACCH211-76L23ZFIN Curated Data
EncodescDNAMGC:195339ZFIN Curated Data
1 - 2 of 2
Show
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
No data available
Citations
1 - 10 of 21
Show