Gene

rnf115a

ID
ZDB-GENE-061215-82
Name
ring finger protein 115a
Symbol
rnf115a Nomenclature History
Previous Names
  • rnf115
  • zgc:158455 (1)
Type
protein_coding_gene
Location
Chr: 16 Mapping Details/Browsers
Description
Predicted to enable ubiquitin protein ligase activity. Acts upstream of or within determination of left/right symmetry. Predicted to be active in cytoplasm. Is expressed in brain. Orthologous to human RNF115 (ring finger protein 115).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
1 figure from Liu et al., 2018
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
2 figures from Liu et al., 2018
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Allele Type Localization Consequence Mutagen Supplier
sa6416Allele with one point mutationUnknownPremature StopENU
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Sequence Targeting Reagents
Targeting Reagent Created Alleles Citations
CRISPR1-rnf115a
    Liu et al., 2018
    MO1-rnf115aN/ALiu et al., 2018
    1 - 2 of 2
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    Human Disease
    Associated With rnf115a Human Ortholog
    No data available
    Associated With rnf115a Via Experimental Models
    No data available
    Gene Ontology
    Protein Domains
    Domain, Family, and Site Summary
    Type InterPro ID Name
    Domain IPR001841 Zinc finger, RING-type
    Family IPR051834 RING finger E3 ubiquitin-protein ligase
    Homologous_superfamily IPR013083 Zinc finger, RING/FYVE/PHD-type
    1 - 3 of 3
    Domain Details Per Protein
    Protein Additional Resources Length RING finger E3 ubiquitin-protein ligase Zinc finger, RING/FYVE/PHD-type Zinc finger, RING-type
    UniProtKB:A1A601 InterPro 310
    1 - 1 of 1
    Transcripts
    Genome Browsers
    Genome Build: GRCz11Chromosome: 16
    Type Name Annotation Method Has Havana Data Length (nt) Analysis
    mRNA rnf115-201 (1) Ensembl 1,769 nt
    1 - 1 of 1
    Interactions and Pathways
    No data available
    Antibodies
    No data available
    Plasmids
    No data available
    Constructs
    No data available
    Marker Relationships
    Relationship Marker Type Marker Accession Numbers Citations
    Contained inBACDKEY-19N13ZFIN Curated Data
    EncodescDNAMGC:158455ZFIN Curated Data
    1 - 2 of 2
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    Sequences
    Orthology
    Comparative Orthology
    Alliance
    Gene Tree
    Ensembl
    Species Symbol Chromosome Accession # Evidence
    HumanRNF1151
    Amino acid sequence comparison (1)
    Conserved genome location (synteny) (1)
    MouseRnf1153
    Amino acid sequence comparison (1)
    Conserved genome location (synteny) (1)
    Citations
    1 - 3 of 3
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