Gene
ncapg
- ID
- ZDB-GENE-041111-282
- Name
- non-SMC condensin I complex, subunit G
- Symbol
- ncapg Nomenclature History
- Previous Names
-
- im:7149538
- im:7151414 (1)
- si:dkeyp-26a9.1
- Type
- protein_coding_gene
- Location
- Chr: 1 Mapping Details/Browsers
- Description
- Acts upstream of or within mitotic sister chromatid segregation. Located in condensed chromosome and cytoplasm. Is expressed in nervous system; optic cup; and pharyngeal arch 3-7 skeleton. Orthologous to human NCAPG (non-SMC condensin I complex subunit G).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 17 figures from 3 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
-
- IMAGE:7149538 (7 images)
- IMAGE:7151414 (10 images)
Wild Type Expression Summary
- All Phenotype Data
- 4 figures from Seipold et al., 2009
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Allele | Type | Localization | Consequence | Mutagen | Supplier |
---|---|---|---|---|---|
s105 | Allele with one point mutation | Unknown | Premature Stop | ENU | |
sa19499 | Allele with one point mutation | Unknown | Premature Stop | ENU | |
sa32673 | Allele with one point mutation | Unknown | Premature Stop | ENU | |
sa32674 | Allele with one point mutation | Unknown | Splice Site | ENU | |
sa39609 | Allele with one point mutation | Unknown | Premature Stop | ENU | |
zko453a | Allele with one deletion | Unknown | Unknown | CRISPR |
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Targeting Reagent | Created Alleles | Citations |
---|---|---|
CRISPR1-ncapg | Sun et al., 2019 | |
CRISPR2-ncapg | Sun et al., 2019 | |
CRISPR3-ncapg | Sun et al., 2019 | |
CRISPR4-ncapg | Sun et al., 2019 | |
CRISPR5-ncapg | Sun et al., 2019 | |
MO1-ncapg | N/A | Seipold et al., 2009 |
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Human Disease
Domain, Family, and Site Summary
Domain Details Per Protein
Protein | Additional Resources | Length | Armadillo-like helical | Armadillo-type fold | Condensin complex subunit 3 | Nuclear condensin complex subunit 3, C-terminal domain |
---|---|---|---|---|---|---|
UniProtKB:F1QJY8 | InterPro | 1003 |
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Interactions and Pathways
No data available
Plasmids
No data available
No data available
Relationship | Marker Type | Marker | Accession Numbers | Citations |
---|---|---|---|---|
Contained in | BAC | DKEYP-26A9 | ZFIN Curated Data | |
Encodes | EST | IMAGE:7149538 | Thisse et al., 2004 | |
Encodes | EST | IMAGE:7151414 | Thisse et al., 2004 |
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Type | Accession # | Sequence | Length (nt/aa) | Analysis |
---|---|---|---|---|
RNA | RefSeq:NM_001256205 (1) | 3476 nt | ||
Genomic | GenBank:CR391911 (1) | 194115 nt | ||
Polypeptide | UniProtKB:F1QJY8 (1) | 1003 aa |
- Babu, S., Takeuchi, Y., Masai, I. (2022) Banp regulates DNA damage response and chromosome segregation during the cell cycle in zebrafish retina. eLIFE. 11
- Sun, Y., Zhang, B., Luo, L., Shi, D.L., Wang, H., Cui, Z., Huang, H., Cao, Y., Shu, X., Zhang, W., Zhou, J., Li, Y., Du, J., Zhao, Q., Chen, J., Zhong, H., Zhong, T.P., Li, L., Xiong, J.W., Peng, J., Xiao, W., Zhang, J., Yao, J., Yin, Z., Mo, X., Peng, G., Zhu, J., Chen, Y., Zhou, Y., Liu, D., Pan, W., Zhang, Y., Ruan, H., Liu, F., Zhu, Z., Meng, A., ZAKOC Consortium (2019) Systematic genome editing of the genes on zebrafish Chromosome 1 by CRISPR/Cas9. Genome research. 30(1):118-26
- Recher, G., Jouralet, J., Brombin, A., Heuzé, A., Mugniery, E., Hermel, J.M., Desnoulez, S., Savy, T., Herbomel, P., Bourrat, F., Peyriéras, N., Jamen, F., and Joly, J.S. (2013) Zebrafish midbrain slow-amplifying progenitors exhibit high levels of transcripts for nucleotide and ribosome biogenesis. Development (Cambridge, England). 140(24):4860-9
- Seipold, S., Priller, F.C., Goldsmith, P., Harris, W.A., Baier, H., and Abdelilah-Seyfried, S. (2009) Non-SMC condensin I complex proteins control chromosome segregation and survival of proliferating cells in the zebrafish neural retina. BMC Developmental Biology. 9:40
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