Gene
si:ch73-234b20.5
- ID
- ZDB-GENE-041008-183
- Name
- si:ch73-234b20.5
- Symbol
- si:ch73-234b20.5 Nomenclature History
- Previous Names
-
- im:7139509 (1)
- Type
- protein_coding_gene
- Location
- Chr: 10 Mapping Details/Browsers
- Description
- Predicted to enable SNAP receptor activity and syntaxin binding activity. Predicted to be involved in SNARE complex assembly and mucus secretion. Predicted to act upstream of or within vesicle-mediated transport. Predicted to be located in cytoplasm; endomembrane system; and membrane. Predicted to be part of SNARE complex. Predicted to be active in mucin granule and plasma membrane. Is expressed in Kupffer's vesicle.
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 2 figures from Thisse et al., 2004
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
-
- IMAGE:7139509 (2 images)
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
| Allele | Type | Localization | Consequence | Mutagen | Supplier |
|---|---|---|---|---|---|
| ct123aGt | Transgenic insertion | Unknown | Unknown | DNA |
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No data available
Human Disease
Domain, Family, and Site Summary
Domain Details Per Protein
| Protein | Additional Resources | Length | Synaptobrevin-like | Synaptobrevin/Vesicle-associated membrane protein | v-SNARE, coiled-coil homology domain |
|---|---|---|---|---|---|
| UniProtKB:A0A8M1P6T1 | InterPro | 101 |
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| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
si:ch73-234b20.5-201
(1)
|
Ensembl | 862 nt |
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Interactions and Pathways
No data available
Plasmids
No data available
No data available
| Relationship | Marker Type | Marker | Accession Numbers | Citations |
|---|---|---|---|---|
| Contained in | BAC | CH73-234B20 | ZFIN Curated Data | |
| Contained in | BAC | CH211-249H16 | ZFIN Curated Data | |
| Encodes | EST | IMAGE:7139509 | Thisse et al., 2004 |
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| Type | Accession # | Sequence | Length (nt/aa) | Analysis |
|---|---|---|---|---|
| RNA | RefSeq:NM_001293183 (1) | 869 nt | ||
| Genomic | GenBank:BX936392 (1) | 180785 nt | ||
| Polypeptide | UniProtKB:A0A8M1P6T1 (1) | 101 aa |
No data available
- Mosimann, C., Panáková, D., Werdich, A.A., Musso, G., Burger, A., Lawson, K.L., Carr, L.A., Nevis, K.R., Sabeh, M.K., Zhou, Y., Davidson, A.J., DiBiase, A., Burns, C.E., Burns, C.G., MacRae, C.A., Zon, L.I. (2015) Chamber identity programs drive early functional partitioning of the heart. Nature communications. 6:8146
- Trinh, A., Hochgreb, T., Graham, M., Wu, D., Ruf-Zamojski, F., Jayasena, C.S., Saxena, A., Hawk, R., Gonzalez-Serricchio, A., Dixson, A., Chow, E., Gonzales, C., Leung, H.Y., Solomon, I., Bronner-Fraser, M., Megason, S.G., and Fraser, S.E. (2011) A versatile gene trap to visualize and interrogate the function of the vertebrate proteome. Genes & Development. 25(21):2306-20
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