Gene

tmf1

ID
ZDB-GENE-040801-25
Name
TATA element modulatory factor 1
Symbol
tmf1 Nomenclature History
Previous Names
  • zgc:100899
Type
protein_coding_gene
Location
Chr: 11 Mapping Details/Browsers
Description
Predicted to be active in Golgi apparatus and endoplasmic reticulum. Orthologous to human TMF1 (TATA element modulatory factor 1).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
2 figures from 2 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Allele Type Localization Consequence Mutagen Supplier
sa5841Allele with one point mutationUnknownPremature StopENU
sa9263Allele with one point mutationUnknownPremature StopENU
sa12876Allele with one point mutationUnknownSplice SiteENU
sa14896Allele with one point mutationUnknownSplice SiteENU
sa41805Allele with one point mutationUnknownSplice SiteENU
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Sequence Targeting Reagents
No data available
Human Disease
Associated With tmf1 Human Ortholog
No data available
Associated With tmf1 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR022091 TATA element modulatory factor 1, TATA binding
Family IPR022092 TATA element modulatory factor 1 DNA binding
Family IPR052602 Growth and transcription regulation protein
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Domain Details Per Protein
Protein Additional Resources Length Growth and transcription regulation protein TATA element modulatory factor 1 DNA binding TATA element modulatory factor 1, TATA binding
UniProtKB:F1REB9 InterPro 1135
UniProtKB:A0A8M9QLK8 InterPro 1134
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Transcripts
Genome Browsers
Genome Build: GRCz11Chromosome: 11
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA tmf1-201 (1) Ensembl 4,782 nt
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Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
No data available
Marker Relationships
Relationship Marker Type Marker Accession Numbers Citations
Contained inBACDKEY-79I1ZFIN Curated Data
EncodesESTIMAGE:7148757Thisse et al., 2004
EncodesESTfc42e09ZFIN Curated Data
EncodescDNAMGC:100899ZFIN Curated Data
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Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Species Symbol Chromosome Accession # Evidence
HumanTMF13
Amino acid sequence comparison (1)
Conserved genome location (synteny) (2)
MouseTmf16
Amino acid sequence comparison (1)
Conserved genome location (synteny) (1)
Citations
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