ZFIN is now using GRCz12tu for Genomic Data
Gene
trmt11
- ID
- ZDB-GENE-040426-953
- Name
- tRNA methyltransferase 11
- Symbol
- trmt11 Nomenclature History
- Previous Names
-
- zgc:56233 (1)
- Type
- protein_coding_gene
- Location
- Chr: 16 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable methyltransferase activity. Predicted to be involved in methylation and tRNA processing. Predicted to be part of tRNA methyltransferase complex. Predicted to be active in cytoplasm. Orthologous to human TRMT11 (tRNA methyltransferase 11).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 4 figures from 2 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
-
- MGC:56233 (1 image)
Wild Type Expression Summary
- All Phenotype Data
- 1 Figure from Mishima et al., 2016
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Conserved_site | IPR002052 | DNA methylase, N-6 adenine-specific, conserved site |
| Domain | IPR000241 | Ribosomal RNA large subunit methyltransferase K/L-like, methyltransferase domain |
| Family | IPR016691 | tRNA (guanine(10)-N(2))-methyltransferase, TRM11 |
| Homologous_superfamily | IPR029063 | S-adenosyl-L-methionine-dependent methyltransferase superfamily |
Domain Details Per Protein
| Protein | Additional Resources | Length | DNA methylase, N-6 adenine-specific, conserved site | Ribosomal RNA large subunit methyltransferase K/L-like, methyltransferase domain | S-adenosyl-L-methionine-dependent methyltransferase superfamily | tRNA (guanine(10)-N(2))-methyltransferase, TRM11 |
|---|---|---|---|---|---|---|
| UniProtKB:A0A8M9PJB6 | InterPro | 431 | ||||
| UniProtKB:Q7T064 | InterPro | 466 | ||||
| UniProtKB:A0A8M1PGS2 | InterPro | 466 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
trmt11-201
(1)
|
Ensembl | 1,555 nt | ||
| mRNA |
trmt11-202
(1)
|
Ensembl | 1,397 nt | ||
| ncRNA |
trmt11-003
(1)
|
Ensembl | 869 nt | ||
| ncRNA |
trmt11-004
(1)
|
Ensembl | 1,082 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers