Gene

uso1

ID
ZDB-GENE-040426-688
Name
USO1 vesicle transport factor
Symbol
uso1 Nomenclature History
Previous Names
  • vdp (1)
  • zgc:55298 (1)
Type
protein_coding_gene
Location
Chr: 1 Mapping Details/Browsers
Description
Predicted to be involved in several processes, including Golgi vesicle transport; intracellular protein transport; and transcytosis. Predicted to act upstream of or within vesicle fusion with Golgi apparatus. Predicted to be located in Golgi membrane and cytosol. Predicted to be active in ER to Golgi transport vesicle membrane; Golgi stack; and endoplasmic reticulum. Is expressed in notochord. Orthologous to human USO1 (USO1 vesicle transport factor).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
7 figures from 2 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Allele Type Localization Consequence Mutagen Supplier
sa1282Allele with one point mutationUnknownSplice SiteENU
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Sequence Targeting Reagents
Targeting Reagent Created Alleles Citations
CRISPR1-uso1
    Sun et al., 2019
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    Human Disease
    Associated With uso1 Human Ortholog
    No data available
    Associated With uso1 Via Experimental Models
    No data available
    Gene Ontology
    Protein Domains
    Domain, Family, and Site Summary
    Type InterPro ID Name
    Domain IPR006953 Vesicle tethering protein Uso1/P115-like, head domain
    Domain IPR006955 Uso1/p115-like vesicle tethering protein, C-terminal
    Family IPR024095 Vesicle tethering protein p115
    Homologous_superfamily IPR011989 Armadillo-like helical
    Homologous_superfamily IPR016024 Armadillo-type fold
    1 - 5 of 7 Show all
    Domain Details Per Protein
    Protein Additional Resources Length Armadillo Armadillo-like helical Armadillo-type fold Uso1/p115-like vesicle tethering protein, C-terminal Vesicle tethering protein p115 Vesicle tethering protein p115, armadillo tether-repeat Vesicle tethering protein Uso1/P115-like, head domain
    UniProtKB:E7F2J5 InterPro 952
    UniProtKB:A0A2R8QLN9 InterPro 949
    UniProtKB:A0A8M3APK5 InterPro 945
    UniProtKB:Q7ZW40 InterPro 956
    1 - 4 of 4
    Transcripts
    Genome Browsers
    Genome Build: GRCz11Chromosome: 1
    Type Name Annotation Method Has Havana Data Length (nt) Analysis
    mRNA uso1-201 (1) Ensembl 4,910 nt
    mRNA uso1-202 (1) Ensembl 3,911 nt
    mRNA uso1-203 (1) Ensembl 808 nt
    mRNA uso1-205 (1) Ensembl 1,242 nt
    mRNA uso1-208 (1) Ensembl 4,901 nt
    1 - 5 of 8 Show all
    Interactions and Pathways
    No data available
    Antibodies
    No data available
    Plasmids
    No data available
    Constructs
    No data available
    Marker Relationships
    Relationship Marker Type Marker Accession Numbers Citations
    Contained inBACCH211-216C6ZFIN Curated Data
    EncodescDNAMGC:55298ZFIN Curated Data
    EncodescDNAMGC:192764ZFIN Curated Data
    Has ArtifactESTfc73f03
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    Sequences
    Orthology
    Comparative Orthology
    Alliance
    Gene Tree
    Ensembl
    Species Symbol Chromosome Accession # Evidence
    HumanUSO14
    Amino acid sequence comparison (1)
    Conserved genome location (synteny) (1)
    MouseUso15
    Amino acid sequence comparison (1)
    Conserved genome location (synteny) (1)
    Citations
    1 - 7 of 7
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