Gene

stambpa

ID
ZDB-GENE-040426-1551
Name
STAM binding protein a
Symbol
stambpa Nomenclature History
Previous Names
  • stambp
  • zgc:66147
Type
protein_coding_gene
Location
Chr: 10 Mapping Details/Browsers
Description
Predicted to enable K63-linked deubiquitinase activity. Predicted to be involved in negative regulation of Ras protein signal transduction. Predicted to act upstream of or within protein K63-linked deubiquitination and proteolysis. Predicted to be active in cleavage furrow and endosome. Orthologous to human STAMBP (STAM binding protein).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
1 figure from Thisse et al., 2004
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Allele Type Localization Consequence Mutagen Supplier
sa401Allele with one point mutationUnknownSplice SiteENU
sa1612Allele with one point mutationUnknownPremature StopENU
sa31802Allele with one point mutationUnknownPremature StopENU
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Sequence Targeting Reagents
Targeting Reagent Created Alleles Citations
MO1-stambpaN/ATse et al., 2009
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Human Disease
Associated With stambpa Human Ortholog
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
Microcephaly-capillary malformation syndrome 614261
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Associated With stambpa Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR000555 JAB1/MPN/MOV34 metalloenzyme domain
Domain IPR015063 USP8 dimerisation domain
Domain IPR037518 MPN domain
Domain IPR044098 STAMBP/STALP-like, MPN domain
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Domain Details Per Protein
Protein Additional Resources Length JAB1/MPN/MOV34 metalloenzyme domain MPN domain STAMBP/STALP-like, MPN domain USP8 dimerisation domain
UniProtKB:Q6TH47 InterPro 418
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Transcripts
Genome Browsers
Genome Build: GRCz11Chromosome: 10
Type Name Annotation Method Has Havana Data Length (nt) Analysis
aberrant processed transcript stambpa-201 (1) Ensembl 1,917 nt
mRNA stambpa-202 (1) Ensembl 2,466 nt
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Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
No data available
Marker Relationships
Relationship Marker Type Marker Accession Numbers Citations
Contained inBACCH211-265M20ZFIN Curated Data
Contained inBACDKEY-88O9ZFIN Curated Data
EncodescDNAMGC:66147ZFIN Curated Data
EncodescDNAMGC:198211ZFIN Curated Data
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Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Species Symbol Chromosome Accession # Evidence
HumanSTAMBP2
Amino acid sequence comparison (1)
Conserved genome location (synteny) (1)
Citations
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