Gene

pvalb9

ID
ZDB-GENE-030805-4
Name
parvalbumin 9
Symbol
pvalb9 Nomenclature History
Previous Names
  • ocmb
  • pvalb3b (1)
  • oncomodulin B
  • zgc:110493
Type
protein_coding_gene
Location
Chr: 12 Mapping Details/Browsers
Description
Predicted to enable calcium ion binding activity. Predicted to be active in cytoplasm. Is expressed in inner ear; pronephric duct; yolk; and yolk syncytial layer. Orthologous to human OCM (oncomodulin) and OCM2 (oncomodulin 2).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
7 figures from 5 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Allele Type Localization Consequence Mutagen Supplier
sa468Allele with one point mutationUnknownPremature StopENU
1 - 1 of 1
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Sequence Targeting Reagents
No data available
Human Disease
Associated With pvalb9 Human Ortholog
No data available
Associated With pvalb9 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Binding_site IPR018247 EF-Hand 1, calcium-binding site
Domain IPR002048 EF-hand domain
Family IPR008080 Parvalbumin
Homologous_superfamily IPR011992 EF-hand domain pair
1 - 4 of 4
Domain Details Per Protein
Protein Additional Resources Length EF-Hand 1, calcium-binding site EF-hand domain EF-hand domain pair Parvalbumin
UniProtKB:Q800A1 InterPro 109
1 - 1 of 1
Transcripts
Genome Browsers
Genome Build: GRCz11Chromosome: 12
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA pvalb9-201 (1) Ensembl 803 nt
mRNA pvalb9-203 (1) Ensembl 1,414 nt
ncRNA pvalb9-002 (1) Ensembl 714 nt
1 - 3 of 3
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Construct Regulatory Region Coding Sequence Species Tg Lines Citations
Tg(-2.9pvalb9:EGFP)
  • pvalb9
  • Danio rerio
2 (8)
Tg(-4.8pvalb9:EGFP)
  • pvalb9
  • Danio rerio
1 (3)
Tg(pvalb9:actb2-mCherry)
  • pvalb9
  • Danio rerio
1 (5)
Tg(pvalb9:ctbp2a-mCherry)
  • pvalb9
  • Danio rerio
1Chen et al., 2017
Tg(pvalb9:EGFP-fscn2b)
  • pvalb9
  • Danio rerio
1 (2)
Tg(pvalb9:EGFP-fscn2b_S38A)
  • pvalb9
  • Danio rerio
1Hwang et al., 2015
Tg(pvalb9:EGFP-fscn2b_S38E)
  • pvalb9
  • Danio rerio
1 (2)
Tg(pvalb9:Hsa.CLRN1_c.144T>G-YFP)
  • pvalb9
  • Danio rerio
  • Homo sapiens
1 (4)
Tg(pvalb9:Hsa.CLRN1-YFP)
  • pvalb9
  • Danio rerio
  • Homo sapiens
1 (3)
Tg(pvalb9:mCherry)
  • pvalb9
  • Danio rerio
1Chen et al., 2017
1 - 10 of 11
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Marker Relationships
Relationship Marker Type Marker Accession Numbers Citations
Contained inBACDKEY-33F9ZFIN Curated Data
EncodescDNAMGC:110493ZFIN Curated Data
1 - 2 of 2
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Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Species Symbol Chromosome Accession # Evidence
HumanOCM7
Amino acid sequence comparison (2)
Conserved genome location (synteny) (1)
Phylogenetic tree (2)
HumanOCM27
Phylogenetic tree (1)
Conserved genome location (synteny) (1)
Amino acid sequence comparison (3)
MouseOcm5
Amino acid sequence comparison (4)
Conserved genome location (synteny) (1)
Phylogenetic tree (2)
Citations
1 - 10 of 23
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