Gene

pdxkb

ID
ZDB-GENE-030616-521
Name
pyridoxal (pyridoxine, vitamin B6) kinase b
Symbol
pdxkb Nomenclature History
Previous Names
  • pdxk (1)
  • si:dkey-263m10.2 (1)
  • si:dz69g10.1
Type
protein_coding_gene
Location
Chr: 1 Mapping Details/Browsers
Description
Predicted to enable pyridoxal kinase activity. Predicted to be involved in pyridoxal 5'-phosphate salvage. Predicted to act upstream of or within phosphorylation. Predicted to be active in cytosol. Orthologous to human PDXK (pyridoxal kinase).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
No data available
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Allele Type Localization Consequence Mutagen Supplier
ct158aGtTransgenic insertionUnknownUnknownDNA
sa15408Allele with one point mutationUnknownSplice SiteENU
zko918aAllele with one delinsUnknownUnknownCRISPR
zko918bAllele with one deletionUnknownUnknownCRISPR
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Sequence Targeting Reagents
Targeting Reagent Created Alleles Citations
CRISPR1-pdxkb (2)
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Human Disease
Associated With pdxkb Human Ortholog
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
Neuropathy, hereditary motor and sensory, type VIC, with optic atrophy 618511
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Associated With pdxkb Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase
Family IPR004625 Pyridoxine kinase
Homologous_superfamily IPR029056 Ribokinase-like
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Domain Details Per Protein
Protein Additional Resources Length Pyridoxamine kinase/Phosphomethylpyrimidine kinase Pyridoxine kinase Ribokinase-like
UniProtKB:B8A4Q2 InterPro 306
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Transcripts
Genome Browsers
Genome Build: GRCz11Chromosome: 1
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA pdxkb-201 (1) Ensembl 1,435 nt
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Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
No data available
Marker Relationships
Relationship Marker Type Marker Accession Numbers Citations
Contained inBACCH73-160H15ZFIN Curated Data
Contained inBACDKEY-22N8ZFIN Curated Data
Contained inFosmidCH1073-228E23ZFIN Curated Data
Contained inPACBUSM1-69G10ZFIN Curated Data
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Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Species Symbol Chromosome Accession # Evidence
HumanPDXK21
Conserved genome location (synteny) (1)
Amino acid sequence comparison (1)
Citations
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