Gene
rpl7
- ID
- ZDB-GENE-030131-8654
- Name
- ribosomal protein L7
- Symbol
- rpl7 Nomenclature History
- Previous Names
-
- bb02h10
- mg:bb02h10
- wu:fa93c11
- Type
- protein_coding_gene
- Location
- Chr: 2 Mapping Details/Browsers
- Description
- Predicted to enable RNA binding activity. Predicted to be a structural constituent of ribosome. Acts upstream of or within regulation of cell cycle. Predicted to be located in cytoplasm and ribosome. Predicted to be part of cytosolic large ribosomal subunit. Orthologous to human RPL7 (ribosomal protein L7).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 1 figure from Thisse et al., 2004
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
-
- IMAGE:6902943 (1 image)
Wild Type Expression Summary
Phenotype Summary
Mutations
Allele | Type | Localization | Consequence | Mutagen | Supplier |
---|---|---|---|---|---|
hi1061Tg | Transgenic insertion | Intron 1 | Unknown | DNA |
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No data available
Human Disease
Domain, Family, and Site Summary
Type | InterPro ID | Name |
---|---|---|
Conserved_site | IPR018038 | Large ribosomal subunit protein uL30, conserved site |
Domain | IPR012988 | Large ribosomal subunit protein uL30, N-terminal, eukaryotes |
Domain | IPR016082 | Large ribosomal subunit protein uL30-like, ferredoxin-like fold domain |
Domain | IPR035808 | Large ribosomal subunit protein uL30, eukaryotic/archaeal |
Family | IPR005998 | Large ribosomal subunit protein uL30, eukaryotic |
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Domain Details Per Protein
Protein | Additional Resources | Length | Large ribosomal subunit protein uL30 | Large ribosomal subunit protein uL30, conserved site | Large ribosomal subunit protein uL30, eukaryotic | Large ribosomal subunit protein uL30, eukaryotic/archaeal | Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamily | Large ribosomal subunit protein uL30-like, ferredoxin-like fold domain | Large ribosomal subunit protein uL30, N-terminal, eukaryotes |
---|---|---|---|---|---|---|---|---|---|
UniProtKB:Q6Q417 | InterPro PDB | 246 |
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Interactions and Pathways
No data available
Plasmids
No data available
No data available
Relationship | Marker Type | Marker | Accession Numbers | Citations |
---|---|---|---|---|
Contained in | BAC | CH211-193N21 | ZFIN Curated Data | |
Encodes | EST | bb02h10 | ||
Encodes | EST | fa93c11 | ||
Encodes | EST | IMAGE:6902943 | Thisse et al., 2004 | |
Encodes | cDNA | MGC:103702 | ZFIN Curated Data | |
Encodes | cDNA | MGC:123071 | ZFIN Curated Data | |
Encodes | cDNA | MGC:173749 | ZFIN Curated Data | |
Is Hybridized by | EST | fa97b04 |
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Type | Accession # | Sequence | Length (nt/aa) | Analysis |
---|---|---|---|---|
RNA | RefSeq:NM_213644 (1) | 827 nt | ||
Genomic | GenBank:CT027743 (2) | 101895 nt | ||
Polypeptide | UniProtKB:Q6Q417 (1) | 246 aa |
- Williams, M.B., Green, G.B., Palmer, J.W., Fay, C.X., Chehade, S.B., Lawrence, A.L., Barry, R.J., Powell, M.L., Harris, M.L., Watts, S.A. (2023) Replacement of Dietary Fish Protein with Bacterial Protein Results in Decreased Adiposity Coupled with Liver Gene Expression Changes in Female Danio rerio. Current developments in nutrition. 8:102057102057
- Xi, L., Zhai, G., Liu, Y., Gong, Y., Lu, Q., Zhang, Z., Liu, H., Jin, J., Zhu, X., Yin, Z., Xie, S., Han, D. (2023) Attenuated glucose uptake promotes catabolic metabolism through activated AMPK signaling and impaired insulin signaling in zebrafish. Frontiers in nutrition. 10:11872831187283
- Han, Y., Fei, Y., Wang, M., Xue, Y., Chen, H., Liu, Y. (2021) Study on the Joint Toxicity of BPZ, BPS, BPC and BPF to Zebrafish. Molecules. 26(14):
- Rassier, G.T., Silveira, T.L.R., Remião, M.H., Daneluz, L.O., Martins, A.W.S., Dellagostin, E.N., Ortiz, H.G., Domingues, W.B., Komninou, E.R., Kütter, M.T., Marins, L.F.F., Campos, V.F. (2020) Evaluation of qPCR reference genes in GH-overexpressing transgenic zebrafish (Danio rerio). Scientific Reports. 10:12692
- Ayobahan, S.U., Eilebrecht, E., Kotthoff, M., Baumann, L., Eilebrecht, S., Teigeler, M., Hollert, H., Kalkhof, S., Schäfers, C. (2019) A combined FSTRA-shotgun proteomics approach to identify molecular changes in zebrafish upon chemical exposure. Scientific Reports. 9:6599
- Yokota, S., Nakamura, K., Kamata, R. (2019) A comparative study of nickel nanoparticle and ionic nickel toxicities in zebrafish: histopathological changes and oxidative stress. The Journal of Toxicological Sciences. 44:737-751
- He, W.X., Wu, M., Liu, Z., Li, Z., Wang, Y., Zhou, J., Yu, P., Zhang, X.J., Zhou, L., Gui, J.F. (2018) Oocyte-specific maternal Slbp2 is required for replication-dependent histone storage and early nuclear cleavage in zebrafish oogenesis and embryogenesis. RNA (New York, N.Y.). 24(12):1738-1748
- Tsai, T.C., Shih, C.C., Chien, H.P., Yang, A.H., Lu, J.K., Lu, J.H. (2018) Anti-apoptotic effects of IGF-I on mortality and dysmorphogenesis in tbx5-deficient zebrafish embryos. BMC Developmental Biology. 18:5
- Bayés, À., Collins, M.O., Reig-Viader, R., Gou, G., Goulding, D., Izquierdo, A., Choudhary, J.S., Emes, R.D., Grant, S.G. (2017) Evolution of complexity in the zebrafish synapse proteome. Nature communications. 8:14613
- Lang, X., Wang, L., Zhang, Z. (2016) Stability evaluation of reference genes for real-time PCR in zebrafish (Danio rerio) exposed to cadmium chloride and subsequently infected by bacteria Aeromonas hydrophila. Aquatic toxicology (Amsterdam, Netherlands). 170:240-250
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