Gene

slc12a8

ID
ZDB-GENE-030131-5654
Name
solute carrier family 12 member 8
Symbol
slc12a8 Nomenclature History
Previous Names
  • fi11e03
  • si:dkey-101k6.7
  • wu:fi11e03 (1)
Type
protein_coding_gene
Location
Chr: 9 Mapping Details/Browsers
Description
Predicted to enable potassium:chloride symporter activity. Acts upstream of or within cilium assembly. Predicted to be located in membrane. Orthologous to human SLC12A8 (solute carrier family 12 member 8).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
No data available
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
2 figures from Shim et al., 2016
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Allele Type Localization Consequence Mutagen Supplier
sa2505Allele with one point mutationUnknownPremature StopENU
Zebrafish International Resource Center (ZIRC) (order this)
sa25433Allele with one point mutationUnknownPremature StopENU
sa41489Allele with one point mutationUnknownPremature StopENU
Zebrafish International Resource Center (ZIRC) (order this)
European Zebrafish Resource Center (EZRC) (order this)
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Sequence Targeting Reagents
Targeting Reagent Created Alleles Citations
MO1-slc12a8N/AShim et al., 2016
MO2-slc12a8N/AShim et al., 2016
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Human Disease
Associated With slc12a8 Human Ortholog
No data available
Associated With slc12a8 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR004841 Amino acid permease/ SLC12A domain
Family IPR004842 SLC12A transporter family
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Domain Details Per Protein
Protein Additional Resources Length Amino acid permease/ SLC12A domain SLC12A transporter family
UniProtKB:A0A8M2BF89 InterPro 708
UniProtKB:A9C3V4 InterPro 697
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Transcripts
Genome Browsers
Genome Build: GRCz11Chromosome: 9
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA slc12a8-201 (1)
Ensembl
Ensembl 796 nt
ZFIN BLAST
mRNA slc12a8-202 (1)
Ensembl
Ensembl 617 nt
ZFIN BLAST
mRNA slc12a8-203 (1)
Ensembl
Ensembl 2,368 nt
ZFIN BLAST
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Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
No data available
Marker Relationships
Relationship Marker Type Marker Accession Numbers Citations
Contained inBACDKEY-101K6ZFIN Curated Data
Contained inBACDKEYP-73B1ZFIN Curated Data
EncodesESTfi11e03
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Sequences
Type Accession # Sequence Length (nt/aa) Analysis
RNARefSeq:NM_001128277 (1)2094 nt
ZFIN BLASTNCBI BLASTEnsemblUCSC BLAT
GenomicGenBank:BX255930 (1)185559 nt
MegaBLASTEnsembl
PolypeptideUniProtKB:A0A8M2BF89 (1)708 aa
ZFIN BLASTSIB BLASTEnsembl Protein Blast
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Species Symbol Chromosome Accession # Evidence
HumanSLC12A83
Amino acid sequence comparison (1)
Conserved genome location (synteny) (1)
MouseSlc12a816
Amino acid sequence comparison (1)
Conserved genome location (synteny) (1)
Citations
TSV
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