Gene

trpm7

ID
ZDB-GENE-021115-2
Name
transient receptor potential cation channel, subfamily M, member 7
Symbol
trpm7 Nomenclature History
Previous Names
  • cb495 (1)
  • nutria (1)
  • tct
  • touchtone
  • transient receptor potential melastatin 7 (1)
Type
protein_coding_gene
Location
Chr: 18 Mapping Details/Browsers
Description
Predicted to enable calcium channel activity and protein kinase activity. Acts upstream of or within several processes, including exocrine pancreas development; swimming behavior; and thigmotaxis. Located in plasma membrane. Is expressed in several structures, including digestive system; immature eye; integument; nervous system; and renal system. Used to study sinoatrial node disease. Human ortholog(s) of this gene implicated in amyotrophic lateral sclerosis-parkinsonism/dementia complex 1. Orthologous to human TRPM7 (transient receptor potential cation channel subfamily M member 7).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
57 figures from 32 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
34 figures from 11 publications
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Allele Type Localization Consequence Mutagen Supplier
agu75Allele with one point mutationExon 18UnknownENU
b508Allele with one deletionUnknownFrameshift, Premature StopENU
b722unknownUnknownUnknownENU
j124e1Allele with one point mutationUnknownPremature StopENU
j124e2unknownUnknownUnknownENU
la013193TgTransgenic insertionUnknownUnknownDNA
mi174Allele with one point mutationUnknownPremature StopENU
os1unknownUnknownUnknownnot specified
os2unknownUnknownUnknownnot specified
sa36550Allele with one point mutationUnknownSplice SiteENU
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Sequence Targeting Reagents
Targeting Reagent Created Alleles Citations
MO1-trpm7N/A (3)
MO2-trpm7N/A (2)
MO3-trpm7N/A (2)
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Human Disease
Associated With trpm7 Human Ortholog
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
amyotrophic lateral sclerosis-parkinsonism/dementia complex 1 Alliance {Amyotrophic lateral sclerosis-parkinsonism/dementia complex, susceptibility to} 105500
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Associated With trpm7 Via Experimental Models
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Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR004166 Alpha-type protein kinase, alpha-kinase domain
Domain IPR005821 Ion transport domain
Domain IPR029601 Transient receptor potential cation channel subfamily M member 7, alpha-kinase domain
Domain IPR032415 TRPM, tetramerisation domain
Domain IPR041491 TRPM, SLOG domain
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Domain Details Per Protein
Protein Additional Resources Length Alpha-type protein kinase, alpha-kinase domain Ion transport domain Protein kinase-like domain superfamily Transient receptor potential cation channel M Transient receptor potential cation channel subfamily M member 7, alpha-kinase domain TRPM, SLOG domain TRPM, tetramerisation domain TRPM, tetramerisation domain superfamily
UniProtKB:Q563W7 InterPro 1774
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Transcripts
Genome Browsers
Genome Build: GRCz11Chromosome: 18
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA trpm7-201 (1) Ensembl 2,499 nt
mRNA trpm7-203 (1) Ensembl 625 nt
mRNA trpm7-204 (1) Ensembl 5,364 nt
mRNA trpm7-205 (1) Ensembl 5,319 nt
ncRNA trpm7-003 (1) Ensembl 514 nt
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Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Construct Regulatory Region Coding Sequence Species Tg Lines Citations
Tg(isl1a-hsp70l:trpm7-EGFP)
  • Danio rerio
Low et al., 2011
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Marker Relationships
Relationship Marker Type Marker Accession Numbers Citations
Contained inFosmidCH1073-401P22ZFIN Curated Data
EncodesESTcb495Thisse et al., 2001
EncodescDNAMGC:194798ZFIN Curated Data
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Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Species Symbol Chromosome Accession # Evidence
HumanTRPM715
Amino acid sequence comparison (2)
Conserved genome location (synteny) (1)
MouseTrpm72
Amino acid sequence comparison (2)
Conserved genome location (synteny) (1)
Citations
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