Gene

crabp1a

ID
ZDB-GENE-020320-3
Name
cellular retinoic acid binding protein 1a
Symbol
crabp1a Nomenclature History
Previous Names
  • crabp1
  • zgc:110497
Type
protein_coding_gene
Location
Chr: 25 Mapping Details/Browsers
Description
Predicted to enable fatty acid binding activity and retinoic acid binding activity. Predicted to be involved in fatty acid transport. Predicted to be active in cytosol and nucleus. Is expressed in several structures, including central nervous system; eye; integument; pleuroperitoneal region; and tail bud. Orthologous to human CRABP1 (cellular retinoic acid binding protein 1).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
16 figures from 7 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Allele Type Localization Consequence Mutagen Supplier
ir1097Allele with one deletionExon 2UnknownCRISPR
wz28Allele with one delinsUnknownUnknownCRISPR
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Sequence Targeting Reagents
1 - 3 of 3
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Human Disease
Associated With crabp1a Human Ortholog
No data available
Associated With crabp1a Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR000463 Cytosolic fatty-acid binding
Domain IPR000566 Lipocalin/cytosolic fatty-acid binding domain
Family IPR031259 Intracellular lipid binding protein
Homologous_superfamily IPR012674 Calycin
1 - 4 of 4
Domain Details Per Protein
Protein Additional Resources Length Calycin Cytosolic fatty-acid binding Intracellular lipid binding protein Lipocalin/cytosolic fatty-acid binding domain
UniProtKB:Q7T0F4 InterPro 138
1 - 1 of 1
Transcripts
Genome Browsers
Genome Build: GRCz11Chromosome: 25
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA crabp1a-201 (1) Ensembl 791 nt
mRNA crabp1a-202 (1) Ensembl 870 nt
1 - 2 of 2
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Construct Regulatory Region Coding Sequence Species Tg Lines Citations
Tg(crabp1a:EGFP,myl7:mTurquoise)
  • Danio rerio
1Zebrafish Nomenclature Committee
1 - 1 of 1
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Marker Relationships
Relationship Marker Type Marker Accession Numbers Citations
Contained inBACCH73-302F10ZFIN Curated Data
Contained inBACDKEY-275P19ZFIN Curated Data
EncodesESTIMAGE:7157841Thisse et al., 2004
EncodescDNAMGC:110497ZFIN Curated Data
EncodescDNAMGC:191914ZFIN Curated Data
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Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Species Symbol Chromosome Accession # Evidence
HumanCRABP115
Conserved genome location (synteny) (1)
Amino acid sequence comparison (4)
MouseCrabp19
Conserved genome location (synteny) (1)
Amino acid sequence comparison (2)
Citations
1 - 10 of 26
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